Confirm file format and reference conventions
MIC / 010 · Microbiome
Microbiome & Metagenomics Profiler
Interactive comparison of taxonomic abundance and ecological diversity across microbiome research cohorts.
SCIENTIFIC PURPOSE
Helps microbiome teams communicate composition, alpha diversity and beta-diversity patterns in supported result tables.
Who it helps
- Microbiome researchers
- Ecology teams
- Gut-microbiome studies
- Bioinformatics students
Supported inputs
- Taxa abundance table
- Alpha-diversity table
- PCoA coordinates
- Sample-group metadata
Useful outputs
- Relative-abundance chart
- Alpha-diversity comparison
- 3D PCoA
- Cohort-oriented export
PROJECT INTELLIGENCE
A structured view of
scope and evidence.
These figures describe the documented public surface—not biological performance, clinical validity or benchmark superiority.
MIC / 010Working demonstration
Relative abundanceShannon diversityBeta diversityPCoA visualisationDATA CONTRACT
What enters, what happens,
what leaves.
01 / INPUT
Taxa abundance table
Alpha-diversity table
PCoA coordinates
Sample-group metadata
02 / ANALYSIS
01Load supported result tables
02Validate samples and groups
03Inspect taxonomic composition
04Compare diversity
05Export selected research figures
03 / OUTPUT
Relative-abundance chart
Alpha-diversity comparison
3D PCoA
Cohort-oriented export
EVIDENCE & INTERPRETATION MATRIX
How to use the project responsibly.
DimensionPublic evidenceInterpretation boundary
Interface7 documented viewsScreenshots demonstrate interaction patterns, not scientific validation.
MethodsRelative abundance · Shannon diversity · Beta diversity · PCoA visualisationMethod presence does not establish suitability for every dataset.
ReproducibilityDefined inputs, stages and outputsVersions, parameters and data provenance must accompany a real analysis.
Scientific useResearch exploration and communicationNo medical, diagnostic or treatment conclusion is produced.
BEFORE INTERPRETATION
Record tool, database and dataset versions
Inspect missing values, outliers and sample labels
Review assumptions behind each selected method
Keep exported figures linked to their source data
Request domain-expert review for consequential claims
TYPICAL RESEARCH FLOW
- 01
Load supported result tables
- 02
Validate samples and groups
- 03
Inspect taxonomic composition
- 04
Compare diversity
- 05
Export selected research figures
INTERFACE GALLERY
Multiple views,
one research task.
Project demonstration captures. Displayed material may be benchmark or demonstration data and is not clinical evidence.
METHODS REPRESENTED
Relative abundanceShannon diversityBeta diversityPCoA visualisation
KNOWN LIMITATIONS
- Does not replace raw-read preprocessing
- Associations do not establish causality
- Compositional data require appropriate statistical treatment
USEFUL QUESTIONS
Before using the output.
Does a diversity difference prove dysbiosis?
No. Diversity measures require study-specific context, statistical testing and careful interpretation.
Which inputs are expected?
Prepared taxonomic abundance, alpha-diversity and PCoA result tables with consistent sample identifiers.