Antimicrobial resistance
AMR Analyst
A research interface for reviewing antimicrobial-resistance gene matches in bacterial genome analysis results.
PROJECT ATLAS
Research tools,
clearly explained.
Browse by scientific purpose. Every project page describes who it is for, expected data, useful outputs, limitations, screenshots and source repository.
12 projects
Scientific literature
PubMed Research Assistant
A source-linked literature discovery workspace for focused biomedical questions.
Transcriptomics
OmicsVis — Differential Expression Explorer
Interactive exploration of differential gene expression and transcriptomic result tables.
Single-cell biology
Single-Cell AI Explorer
Interactive exploration of annotated single-cell populations, UMAP coordinates and marker-gene results.
Structural biology
Protein 3D Modeler
A browser-based molecular viewer for protein structures and research-oriented binding-region inspection.
Genomic variants
Clinical Variant Annotator
A research-oriented interface for filtering and reviewing human VCF records with evidence context.
Genome inspection
Interactive Genome Browser
Web-native inspection of genomic tracks and candidate loci using IGV.js.
Public transcriptomic data
GEO Data Miner & GSEA
A guided workflow for finding public GEO studies and preparing differential-expression and enrichment analysis.
Reproducible workflows
NGS Pipeline Architect
A guided design surface for reproducible genomics workflow templates across local, HPC and controlled cloud environments.
Microbiome
Microbiome & Metagenomics Profiler
Interactive comparison of taxonomic abundance and ecological diversity across microbiome research cohorts.
Spatial biology
Spatial Transcriptomics Atlas
A production-oriented research framework for spatial neighbourhoods and cell–cell communication across Visium, Xenium and MERFISH data.
Structural biology
AlphaFold Complex Evaluator
Analysis utilities for AlphaFold biomolecular-complex predictions, including interface confidence and surface-oriented measures.