Separate canonical project pages
FORNEUS BIOTECH12 project pages ↗FORNEUS TECHNOLOGIES · LIFE SCIENCES
Biological complexity.
Engineered into clarity.
A public research atlas connecting 12 projects across genomics, multi-omics, structural biology, microbiome science and evidence-grounded scientific AI.
- 12
- project pages
- 21
- interface captures
- Local-first
- critical workflows
12 PROJECTSFORNEUS BIOTECH · PROJECT ATLAS
FORNEUS
SCROLL TO EXPLORE ↓
GENOMICS MULTI-OMICS STRUCTURAL BIOLOGY SCIENTIFIC AI REPRODUCIBLE RESEARCH PRECISION ONCOLOGY — RESEARCH CONTEXT
PORTFOLIO DATA / LIVE FROM REGISTRY
The research surface,
measured honestly.
Counts are generated from the canonical public project registry. They describe documented scope and evidence—not scientific performance.
Projects with working demonstrations
Documented screenshots across modules
Distinct scientific categories
49PUBLIC VIEWS
12 projects10 demonstrated11 domainsProjectDomainStageViewsRoute
01 / WHAT YOU CAN DO
A practical workspace for
biological data and research.
Choose a task, provide the supported research data, explore the result and export a clear visual or structured output. Each tool is presented with its intended use and limits.
Explore gene expression
Load differential-expression tables to inspect volcano plots, heatmaps and sample-level patterns.
INPUT · DEG / EXPRESSION CSVOUTPUT · INTERACTIVE FIGURESStudy cell populations
Explore UMAP coordinates, annotated cell types and marker genes from single-cell experiments.
INPUT · METADATA / EXPRESSIONOUTPUT · CLUSTERS / MARKERSInspect genomic variants
Review VCF records, chromosome distributions and evidence context for research prioritisation.
INPUT · VCF 4.2OUTPUT · FILTERED RESEARCH VIEWVisualise protein structures
Open PDB structures and inspect three-dimensional folds and potential binding regions.
INPUT · PDB ID / STRUCTUREOUTPUT · 3D RESEARCH VIEWProfile microbiomes
Compare taxonomic composition and diversity patterns between research cohorts.
INPUT · TAXA / DIVERSITY TABLESOUTPUT · ABUNDANCE / PCoAFind scientific literature
Search PubMed and organise source-linked biomedical papers around a focused question.
INPUT · RESEARCH QUERYOUTPUT · SOURCED LITERATURE SETLIVE RESEARCH OBJECTS
Biology as a
responsive system.
Hover or focus each object to expose its research layer. Every object opens the project whose data model it represents.
GENOMIC SEQUENCE
Variant evidence
Move from nucleotide position to research-oriented evidence context.
Explore variants ↗CELLULAR SPACEPopulation structure
Inspect clusters, markers and heterogeneity across single-cell coordinates.
Enter cell space ↗MOLECULAR FORMProtein structure
Translate three-dimensional folds into an inspectable molecular view.
Inspect structures ↗02 / RESEARCH DOMAINS
A connected atlas of
biological inquiry.
Enter through a scientific problem, method or evidence need—not through marketing categories.
01↗
Genomics & clinical variants
VCF annotation, genome inspection and evidence-aware variant prioritisation.
VEP · ClinVar · IGV.js02↗
Transcriptomics & single-cell
Differential expression, cell-state discovery and trajectory inference.
Scanpy · UMAP · CellRank03↗
Structural biology
Protein structure, binding-pocket analysis and biomolecular complex evaluation.
AlphaFold · PDB · py3Dmol04↗
Microbiome & resistance
Ecological diversity, dysbiosis profiling and antimicrobial-resistance analysis.
QIIME2 · CARD · PCoA05↗
Scientific AI
Source-grounded literature intelligence and specialist research copilots.
PubMed · RAG · FAISS06↗
Reproducible infrastructure
Containerised, auditable workflows for local, HPC and controlled cloud execution.
Nextflow · WDL · Docker03 / SELECTED PROJECTS
Six entry points into
the complete project atlas.
In research Working demonstration
FLAGSHIP PLATFORM
The Forneus Grimoire
An integrated research environment unifying eleven bioinformatics modules behind a coherent analytical interface.
Open detailed project page ↗CLINICAL GENOMICS
Clinical Variant Annotator
Evidence-oriented VCF annotation with structural mapping, pharmacogenomics context and explicit limitations.
Open detailed project page ↗SPATIAL BIOLOGY
Spatial Transcriptomics Atlas
A reproducible framework for spatial neighbourhood analysis and ligand–receptor communication.
Open detailed project page ↗STRUCTURAL BIOLOGY
AlphaFold Complex Evaluator
PAE, SASA and interface-level analysis for protein–DNA, protein–RNA and protein–ligand complexes.
Open detailed project page ↗MICROBIOME
Metagenomic Dysbiosis Profiler
16S profiling with transparent diversity measures and interactive ecological visualisation.
Open detailed project page ↗SCIENTIFIC AI
PubMed Research Assistant
Source-grounded retrieval and synthesis for biomedical literature, designed around traceable evidence.
Open detailed project page ↗RESEARCH USE These tools support exploration, visualisation and reproducible research. They are not medical devices and do not replace clinical interpretation.
04 / EXAMPLE OUTPUTS
See what the projects
help researchers examine.
Interface captures from project demonstrations. Visuals show supported analysis patterns; displayed datasets are demonstration or benchmark material unless stated otherwise.
05 / EVIDENCE INDEX
Methods, outputs
and limits in one atlas.
The detailed project pages now contain the supplied project outputs in their own scientific context. This index keeps the homepage useful without duplicating those projects.
Spatial biologyXenium · scRNA-seq · Squidpy · TangramOpen analysis outputs ↗Single-cell analysisPBMC · UMAP · markers · RNA velocityOpen analysis outputs ↗Microbiome research16S rRNA · QIIME2R · diversity · PCoAOpen analysis outputs ↗Microbial genomicsAMR · MLST · distance matrices · phylogenyOpen analysis outputs ↗
Research boundary: these pages document supplied analytical outputs and their methods. They do not make clinical, causal or therapeutic claims.
06 / IMMUNOINFORMATICS RESEARCH RECORDS
Candidate analysis,
kept in context.
These supplied records are presented as research evidence rather than a separate commercial product catalogue. Their scope and limitations remain visible.
SUPPLIED RESEARCH RECORD · 4 FIGURES
SARS-CoV-2 epitope screening
B-cell epitope prediction · candidate rankingSupplied project material documents an immunoinformatics screening workflow and candidate-review outputs for the SARS-CoV-2 surface glycoprotein. It is a research artifact, not a vaccine-efficacy or clinical claim.
SUPPLIED RESEARCH RECORD · 4 FIGURES
Bundibugyo virus GP epitope analysis
B-cell candidate analysis · immunogenicity profileSupplied project material documents candidate-ranking and protein-context visualisations for Bundibugyo virus glycoprotein analysis. Experimental and clinical validation remain outside this public research record.
JN
RESEARCH LEAD / PERSON ENTITY
Juliia
Nuzhnenko.
Bioengineer & Data Specialist (MSc)
Designing end-to-end analytical systems across computational biology, multi-omics, structural biology and scientific AI—with an emphasis on reproducibility and publication-ready evidence.
TranscriptomicsSingle-cellClinical genomicsStructural biologyScientific AI
Verified GitHub profile ↗05 / TRUST STANDARD
Built for scrutiny,
not spectacle alone.
Provenance
Version, owner, source and confidence travel with every material research object.
Privacy
No genetic, medical or free-form user data is sent to public analytics.
Accessibility
Scientific graphics retain textual alternatives and reduced-motion support.
Honest stage
Research, demonstration and validated product claims remain visibly distinct.
FORNEUS BIOTECH
From biological signal
to defensible insight.
Explore the research portfolio, methods and evidence architecture.
Enter the atlas ↗089